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| 100 | 1 | _aKnudsen, Steen. | |
| 245 | 1 | 2 |
_aA biologist's guide to analysis of DNA microarray data / _cSteen Knudsen. |
| 260 |
_aNew York : _bWiley-Interscience, _c©2002. |
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| 300 |
_a1 online resource (xiii, 125 pages, [8] pages of plates) : _billustrations (some color) |
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| 336 |
_atext _btxt _2rdacontent |
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| 337 |
_acomputer _bc _2rdamedia |
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| 338 |
_aonline resource _bcr _2rdacarrier |
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| 504 | _aIncludes bibliographical references (pages 104-122). | ||
| 504 | _aIncludes bibliographical references and index. | ||
| 505 | 0 | 0 |
_tHybridization -- _tAffymetrix GeneChip Technology -- _tSpotted Arrays -- _tSerial Analysis of Gene Expression (SAGE) -- _tExample: Affymetrix vs. Spotted Arrays -- _tOverview of Data Analysis -- _tBasic Data Analysis -- _tAbsolute Measurements -- _tScaling -- _tExample: Linear and Nonlinear Scaling -- _tDetection of Outliers -- _tFold Change -- _tSignificance -- _tNonparametric Tests -- _tCorrection for Multiple Testing -- _tExample I: t-Test and ANOVA -- _tExample II: Number of Replicates -- _tVisualization by Reduction of Dimensionality -- _tPrincipal Component Analysis -- _tExample 1: PCA on Small Data Matrix -- _tExample 2: PCA on Real Data -- _tCluster Analysis -- _tHierarchical Clustering -- _tK-means Clustering -- _tSelf-Organizing Maps -- _tDistance Measures -- _tExample: Comparison of Distance Measures -- _tNormalization -- _tVisualization of Clusters -- _tExample: Visualization of Gene Clusters in Bladder Cancer -- _tBeyond Cluster Analysis -- _tFunction Prediction -- _tDiscovery of Regulatory Elements in Promoter Regions -- _tExample 1: Discovery of Proteasomal Element -- _tExample 2: Rediscovery of Mlu Cell Cycle Box (MCB) -- _tIntegration of data -- _tReverse Engineering of Regulatory Networks -- _tThe Time-Series Approach -- _tThe Steady-State Approach -- _tLimitations of Network Modeling -- _tExample 1: Steady-State Model -- _tExample 2: Steady-State Model on Real Data -- _tExample 3: Steady-State Model on Real Data -- _tExample 4: Linear Time-Series Model -- _tMolecular Classifiers -- _tClassification Schemes -- _tNearest Neighbor -- _tNeural Networks -- _tSupport Vector Machine. |
| 520 | _aA Biologist's Guide to Analysis of DNA Microarray Data Steen Knudsen Microarrays are low-density arrays of DNA molecules that permit many hybridization experiments to be performed in parallel. A Biologist's Guide to Analysis of DNA Microarray Data is the first authoritative text to focus on analysis (as opposed to technology) in diverse biological and medical applications of microarrays. Written for biologists without special training in data analysis and statistics, the Guide takes over where the image analysis software that accompanies DNA array equipment typically leaves off with a file of signal intensities and fold changes compared to a control. The broad spectrum of established analysis approaches is covered, including cluster analysis, function prediction, and principal component analysis. A thorough, critical review of software programs is presented, and criteria for selecting programs are discussed. Each chapter contains a Further Reading section categorized by topic as well as a summary, and highlights numerous real examples to illustrate the key concepts.; Chapter topics include: Basic data analysis Visualization by reduction of dimensionality Cluster analysis of expression data Molecular classifiers Genotyping chips Software issues and data formats A Biologist's Guide to Analysis of DNA Microarray Data meets the needs of research professionals, students, and trainees alike for a compact yet thorough guide to analyzing microarray data. | ||
| 588 | 0 | _aPrint version record. | |
| 650 | 0 | _aDNA microarrays. | |
| 650 | 2 | _aOligonucleotide Array Sequence Analysis. | |
| 650 | 6 | _aPuces à ADN. | |
| 650 | 7 |
_aDNA microarrays. _2fast _0(OCoLC)fst00886592 |
|
| 650 | 0 | 7 |
_aDatenanalyse. _2swd |
| 650 | 0 | 7 |
_aDNS. _2swd |
| 650 | 0 | 7 |
_aMicroarray. _2swd |
| 653 | _aMolecular Cell Biology. | ||
| 655 | 4 | _aElectronic books. | |
| 710 | 2 | _aJohn Wiley & Sons. | |
| 773 | 0 | _tWiley e-books | |
| 776 | 0 | 8 |
_iPrint version: _aKnudsen, Steen. _tBiologist's guide to analysis of DNA microarray data. _dNew York : Wiley-Interscience, ©2002 _z0471224901 _w(DLC) 2002072380 |
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_uhttps://eresourcesptsl.ukm.remotexs.co/user/login?url=https://onlinelibrary.wiley.com/book/10.1002/0471227587 _zWiley Online Library |
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